Download results

Web shell

We discussed some of the methods to download results. Here we will download the results file from using the web shell.

CTL-CMD-SHIFT to open sidebar

Click on the icon in Devices

Click on the following folders:

  • home
  • mmandel (well, your name)
  • results
  • example2

Double-click on desired files to download. Focus on:

  • log.txt
  • samples.yml
  • summary_gene_table.txt

Alternate Method: Dropbox

Sign up for Dropbox account. Separate account than your main one. You will end up sharing a folder between the accounts.

Set up the shared folder. Make a folder in your main account, invite your new account. Log into your new account (web site) and accept the invitation (“Add to Dropbox”)

Install Dropbox on the server

cd ~ && wget -O - "https://www.dropbox.com/download?plat=lnx.x86_64" | tar xzf -

Run Dropbox:

~/.dropbox-dist/dropboxd

Authenticate in a browser using the provided URL.

Download python script to control Dropbox:

cd

mkdir scripts

cd scripts

wget https://www.dropbox.com/download?dl=packages/dropbox.py

For easy access, put a symlink to the script anywhere in your PATH.